Cheng WA 2005
ABSTRACT
MotifMarker is a tool designed to search for motifs whose consensus are represented by regular expressions.
KEYWORD: Bioinformatics, motif, structure, regular expression
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Manual/Description (PDF; 336Kb)
Source and Binaries (ZIP; 3.02Mb)
IMAGE GALLERY:
Protein structures were obtained from SWISS-MODEL: an automated protein homology-modeling server and model image generated and presented in Swiss-pdbViewer
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3D-structural model of Homo sapiens CDK2 highlighting the PSTAIRE region, ATP-binding domain and the kinase domain |
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Superposition of Homo sapiens CDKs showing the three important domains |
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REFERENCES
The RSBC Protein Data Bank (online) http://www.rcsb.org/pdb/ [Available: 12 May 2005 ]
Martz E. (n.d.) Rasmol Homepage (online) http://www.umass.edu/microbio/rasmol/index2.htm [Available: 12 May 2005 ]
Guex N, and Schwede T. (n.d.) DeepView Scripting Language. (Online) http://tw.expasy.org/spdbv/text/script.htm [Available: 12 May 2005 ]
Schwede T, Kopp J, Guex N, and Peitsch MC (2003) SWISS-MODEL: an automated protein homology-modeling server. Nucleic Acids Research 31 : 3381-3385.
Guex, N. and Peitsch, M. C. (1997) SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modelling. Electrophoresis 18 : 2714-2723.
Peitsch, M. C. (1995) Protein modeling by E-mail Bio/Technology 13 : 658-660.